Information for 10-TACGTGAGAC (Motif 17)

A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T C G T A
p-value:1e-3
log p-value:-7.770e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background94.1 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TACGTGAGAC
GGGTACGTGC---
 A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TACGTGAGAC
TACGTGCV--
 A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TACGTGAGAC
RTACGTGC---
 A C G T A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TACGTGAGAC
GGACGTGC---
 A C G T A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

GMEB2/MA0862.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TACGTGAGAC
TTACGTAA---
 A C G T A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TACGTGAGAC-
-AGGTGTGAAM
 A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TACGTGAGAC
TTGCGTGCVA-
 A C G T A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

Gmeb1/MA0615.1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TACGTGAGAC--
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TACGTGAGAC--
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

Crem/MA0609.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TACGTGAGAC
TTACGTCATN-
 A C G T A C G T C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A A C G T