Information for 14-GGCCGTCAAT (Motif 21)

A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C G T A A G T C A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.770e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 0.0bp
Average Position of motif in Background192.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGCCGTCAAT--
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PBX2/MA1113.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGCCGTCAAT---
-NCTGTCAATCAN
 A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A T G C T A G C G A C T T C A G G A C T T G A C G T C A T G C A G A C T G T A C G C T A A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGCCGTCAAT---
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGCCGTCAAT--
GGCCATAAATCA
 A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCCGTCAAT
-GCTGTCAA-
 A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCCGTCAAT--
GSCTGTCACTCA
 A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCCGTCAAT---
GGCCATAAATCAC
 A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGCCGTCAAT--
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGCCGTCAAT-
---RRTCAATA
 A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGCCGTCAAT--
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C