Information for 17-ACGCTTACTT (Motif 24)

C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T C G T A C G T A A C T G A G T C A C T G A C G T
p-value:1e-3
log p-value:-7.770e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets174.0 +/- 0.0bp
Average Position of motif in Background125.2 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACGCTTACTT-
NNACTTACCTN
 C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACGCTTACTT
CAAGCTT----
 A C G T C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ACGCTTACTT
TAAAAATGCTGACTT
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACGCTTACTT
AAAATGCTGACT-
 A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACGCTTACTT----
GACTTTTAWTTTGAA
 A C G T C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACGCTTACTT
AATTTGCTGAC--
 A C G T A C G T A C G T C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACGCTTACTT-
-TGTTTACTTT
 C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACGCTTACTT-
-TGTTTACTTT
 C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACGCTTACTT-
-TGCTGACTCA
 C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

BARHL2/MA0635.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACGCTTACTT
ANCGTTTANN-
 A C G T C G T A A G T C A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T