Information for 12-AGAAGAATCTAA (Motif 26)

C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T
p-value:1e-3
log p-value:-7.770e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets177.0 +/- 0.0bp
Average Position of motif in Background114.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0072.1_Sox5_1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGAAGAATCTAA-
TTTAGAACAATAAAAT
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGAAGAATCTAA-
TTAAGAACAATAAATT
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGAAGAATCTAA
TTCTAGAABNTTCTA-
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGAAGAATCTAA--
TNNAGAACAATANATNN
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGAATCTAA
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGAAGAATCTAA
NGAAGC------
 C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGAAGAATCTAA--
AATGAACAATGGAATT
 A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGAATCTAA----
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGAATCTAA
NTTNAGAACAATTA--
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGAAGAATCTAA
CAAAATCGAAACTAA
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A