Information for 25-GCTCTAATGC (Motif 34)

A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T C G T A A C T G C G T A A C T G A G T C
p-value:1e-3
log p-value:-7.077e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets127.0 +/- 0.0bp
Average Position of motif in Background80.5 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCTCTAATGC--
AGNGTTCTAATGANN
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCTCTAATGC
-CACTAATT-
 A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C
A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCTCTAATGC--
--GCTAATCCCC
 A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCTCTAATGC--
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCTCTAATGC--
--CCTAATCCGC
 A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCTCTAATGC--
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCTCTAATGC--
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCTCTAATGC-
---YTAATCCY
 A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCTCTAATGC--
----TAATCCCN
 A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTCTAATGC
--GCTAATCC
 A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C