Information for 19-AGAAAGGCTGGC (Motif 36)

C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
p-value:1e-3
log p-value:-7.077e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background97.3 +/- 47.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAAAGGCTGGC-----
--AAAACCTGGANHGGR
 C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAAAGGCTGGC-----
-NGTAGGTTGGCATNNN
 C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAGGCTGGC--
TAYAAAAGBWGGCAG
 A C G T C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A C G T
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AGAAAGGCTGGC-
-----VGCTGGCA
 C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGAAAGGCTGGC
GGAGAAAGGTGCGA
 A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAGGCTGGC
AACAAAGG-----
 A C G T C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGAAAGGCTGGC
AAAACAAAGG-----
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGAAAGGCTGGC--
-----GGTTGGCAT
 C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGAAAGGCTGGC
---TWGTCTGV-
 C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAGGCTGGC
RACAAWGG-----
 A C G T C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G T C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T