Information for 2-TTTAAGTG (Motif 41)

A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G A T A C G T C T G A C G T A C G T A
p-value:1e-2
log p-value:-6.851e+00
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif26.32%
Number of Background Sequences with motif1947.8
Percentage of Background Sequences with motif4.33%
Average Position of motif in Targets84.9 +/- 58.2bp
Average Position of motif in Background99.1 +/- 62.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TTTAAGTG--
NTCAAGTGGN
 A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TTTAAGTG--
-TTAAGTGGN
 A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TTTAAGTG-
NTCAAGTGG
 A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGTG-----
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TTTAAGTG--
-TTAAGTGGT
 A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TTTAAGTG-
-TTAAGTGC
 A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGTG------
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGTG------
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----TTTAAGTG-----
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGTG-----
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A