Information for 4-ACAGCAAA (Motif 42)

C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G G T A C A C G T A C T G C G A T
p-value:1e-2
log p-value:-5.718e+00
Information Content per bp:1.883
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif26.32%
Number of Background Sequences with motif2517.7
Percentage of Background Sequences with motif5.60%
Average Position of motif in Targets85.6 +/- 41.9bp
Average Position of motif in Background101.0 +/- 67.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---ACAGCAAA-
VSCACATCAAAG
 A C G T A C G T A C G T C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A A C G T
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ACAGCAAA------
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ACAGCAAA------
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ACAGCAAA--
ASATCAAAGG
 C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A A C G T A C G T
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ACAGCAAA--
ACATCAAAGG
 C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A A C G T A C G T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ACAGCAAA----
AAAGATCAAAGGAA
 A C G T A C G T C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---ACAGCAAA------
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ACAGCAAA--
ACWTCAAAGG
 C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A A C G T A C G T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ACAGCAAA------
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ACAGCAAA--
AAAGATCAAAGG
 A C G T A C G T C G T A G T A C C G T A A C T G A G T C C G T A C G T A C G T A A C G T A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G