Information for 1-CTTTAAAGTC (Motif 3)

G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C
Reverse Opposite:
A C T G G T C A A T G C A C G T A C G T C A G T C G T A C G T A C G T A A C T G
p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.880
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif14.71%
Number of Background Sequences with motif106.9
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets109.6 +/- 56.5bp
Average Position of motif in Background107.7 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTTTAAAGTC
CCTTTGATGT-
 A C G T G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTTTAAAGTC
CCTTTGAWGT-
 A C G T G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAAAGTC-
TNCCTTTGATCTTN
 A C G T A C G T A C G T G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTTAAAGTC
CCTTTGATST-
 A C G T G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTTTAAAGTC--
CTTTGATGTGSB
 G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C A C G T A C G T
A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTTAAAGTC-
-TTTGAAACCG
 G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTTTAAAGTC
ATTTGAATT-
 G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CTTTAAAGTC
TTCAAAWTAAAAGTC
 A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTAAAGTC--
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTAAAGTC--
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C G T G C T A C G T A C G T A A T C G A C G T A G T C A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A