Information for 3-GGGGGAGAGACT (Motif 4)

C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T
Reverse Opposite:
C T G A C T A G A C G T A G T C C G A T A G T C A C G T G A T C A T G C A T G C G T A C G T A C
p-value:1e-7
log p-value:-1.685e+01
Information Content per bp:1.745
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif23.53%
Number of Background Sequences with motif744.7
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets82.5 +/- 60.4bp
Average Position of motif in Background99.2 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGGGGAGAGACT
----NCGTGACN
 C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGGGGAGAGACT-
---GCAGTGATTT
 C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T A C G T
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGGGGAGAGACT--
----CNGTGATTTN
 C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGGGAGAGACT
TGGGGA------
 C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGGGGAGAGACT
VTGYGKGGGAGK----
 A C G T A C G T A C G T A C G T C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGGGGAGAGACT-
-GGTTAGAGACCT
 C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T A C G T
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGGGAGAGACT
-TGGAACAGMA-
 C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGGGAGAGACT
AGGTGHCAGACA
 C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGGGGAGAGACT-
AGGTGNCAGACAG
 C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

KLF16/MA0741.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGGGGAGAGACT
GGGGGCGTGGC-
 C A T G C A T G A T C G A T C G C T A G C G T A C T A G C G T A A C T G C G T A A G T C A G C T
C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C A C G T