Information for 9-TTGAATCATGGG (Motif 10)

A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G
Reverse Opposite:
A G T C A G T C G T A C G C T A A C G T T C A G C T G A C G A T G C A T G T A C G C T A T C G A
p-value:1e-33
log p-value:-7.622e+01
Information Content per bp:1.604
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets98.9 +/- 53.5bp
Average Position of motif in Background104.1 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa9/MA0594.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTGAATCATGGG
-TGATTTATGGC
 A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G
A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTGAATCATGGG-
NNCTNAATTATGANN
 A C G T A C G T A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTGAATCATGGG
-TGATTGATGA-
 A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

FOS/MA0476.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTGAATCATGGG
TGTGACTCATT--
 A C G T A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTGAATCATGGG-
-TGATTTATGGCC
 A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G A C G T
A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

FOSL1::JUND/MA1142.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTGAATCATGGG
ATGAGTCATN--
 A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G
C T G A C A G T C A T G G T C A T A C G G A C T T G A C G T C A A G C T G A T C A C G T A C G T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTGAATCATGGG
RTGATTKATRGN
 A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G
C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTGAATCATGGG
ATTGCATCAK---
 A C G T A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTGAATCATGGG
ATTGCATCAT---
 A C G T A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTGAATCATGGG
GGTGACTCATC--
 A C G T A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T A C G T