Information for 3-CGCCATGTAG (Motif 11)

A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A T G C C G T A C G A T A C T G A C T G G T A C A C T G
p-value:1e-32
log p-value:-7.576e+01
Information Content per bp:1.878
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets113.1 +/- 65.3bp
Average Position of motif in Background64.5 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATGTAG
GCCGCCATCTTG
 A C G T A C G T A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGCCATGTAG
GTCCGCCATTA--
 A C G T A C G T A C G T A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATGTAG
GCNGCCATCTTG
 A C G T A C G T A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCCATGTAG----
GCACAYAGTAGGKCY
 A C G T A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

MYCN/MA0104.4/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGCCATGTAG--
GGCCACGTGGCC
 A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G A C G T A C G T
T A C G T C A G T A G C T G A C C T G A A G T C T C A G G A C T A C T G A T C G A G T C A T G C

NFIC/MA0161.2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATGTAG
NNTGCCAAGNN-
 A C G T A C G T A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGCCATGTAG----
AATATACATGTAATATA
 A C G T A C G T A C G T A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGCCATGTAG----
AAAATACATGTAATACT
 A C G T A C G T A C G T A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCCATGTAG-----
NNNTTAGGTAGCNTNT
 A C G T A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PH0098.1_Lhx8/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGCCATGTAG----
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T