Information for 12-TTCTCGTAATCC (Motif 14)

A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C
Reverse Opposite:
A C T G T A C G G T C A C A G T A C G T C G T A A G T C A C T G C G T A C A T G G T C A C T G A
p-value:1e-30
log p-value:-6.997e+01
Information Content per bp:1.768
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.0 +/- 63.3bp
Average Position of motif in Background73.3 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TTCTCGTAATCC-
----CTTAATCCC
 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.68
Offset:6
Orientation:forward strand
Alignment:TTCTCGTAATCC--
------TAATCCCN
 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TTCTCGTAATCC--
----GCTAATCCCC
 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TTCTCGTAATCC-
-----TTAATCCC
 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TTCTCGTAATCC-
-----TTAATCCT
 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TTCTCGTAATCC--
----CCTAATCCGC
 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TTCTCGTAATCC--
----NYTAATCCYB
 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TTCTCGTAATCC-
-----YTAATCCY
 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TTCTCGTAATCC-
-----TTAATCCG
 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTCTCGTAATCC
----GCTAATCC
 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C