Information for 4-AAGGGAAWTA (Motif 16)

G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A
Reverse Opposite:
G C A T G T C A G C A T G C A T C A G T A T G C T A G C A G T C G C A T C A G T
p-value:1e-30
log p-value:-6.914e+01
Information Content per bp:1.640
Number of Target Sequences with motif1301.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif940.8
Percentage of Background Sequences with motif3.47%
Average Position of motif in Targets101.9 +/- 55.0bp
Average Position of motif in Background102.9 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAGGGAAWTA-
AAGGCAAGTGT
 G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PH0005.1_Barhl1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAGGGAAWTA----
AACAACCAATTAATTC
 A C G T A C G T G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A A C G T A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAGGGAAWTA----
AAAAACCAATTAAGAA
 A C G T A C G T G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0108.1_Msx3/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAGGGAAWTA----
CAAAACCAATTAATTT
 A C G T A C G T G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A A C G T A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0007.1_Barx1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGGGAAWTA------
AAAGTAATTAGTGAAT
 G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

RAX/MA0718.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAGGGAAWTA--
--GCCAATTAAC
 G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C

HESX1/MA0894.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AAGGGAAWTA--
--NCCAATTANC
 G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C

GBX2/MA0890.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAGGGAAWTA--
--ACCAATTAGC
 G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C

Nobox/MA0125.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AAGGGAAWTA
--ACCAATTA
 G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A
A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGGGAAWTA-
AACAAGGAAGTAA
 A C G T A C G T G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A A C G T
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A