Information for 6-CCATATTGTC (Motif 18)

A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C
Reverse Opposite:
A C T G G T C A G T A C G C T A C T G A G C A T T C G A C A G T C T A G T A C G
p-value:1e-28
log p-value:-6.674e+01
Information Content per bp:1.650
Number of Target Sequences with motif4626.0
Percentage of Target Sequences with motif17.13%
Number of Background Sequences with motif3973.8
Percentage of Background Sequences with motif14.65%
Average Position of motif in Targets98.8 +/- 55.9bp
Average Position of motif in Background100.2 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Neurog1/MA0623.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CCATATTGTC
ACCATATGGT-
 A C G T A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCATATTGTC
-CTCATTGTC
 A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

OLIG3/MA0827.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCATATTGTC
ANCATATGGT-
 A C G T A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCATATTGTC
ACCATATGGT-
 A C G T A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T A C G T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CCATATTGTC
GCNGCCATCTTG--
 A C G T A C G T A C G T A C G T A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCATATTGTC
AACATATGTT-
 A C G T A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCATATTGTC
GCCATATGGT-
 A C G T A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCATATTGTC
ANCATATGGT-
 A C G T A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCATATTGTC
ANCATATGTT-
 A C G T A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCATATTGTC------
CNNNTATTGTTCNNNNN
 A C G T A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A