Information for 2-STGTRAGATGAA (Motif 2)

A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A
Reverse Opposite:
G A C T C G A T A G T C G T C A A G C T T A G C G C A T G A T C G T C A A G T C C G T A T A G C
p-value:1e-42
log p-value:-9.698e+01
Information Content per bp:1.808
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.1 +/- 58.2bp
Average Position of motif in Background148.0 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:STGTRAGATGAA---
-NNTNTCATGAATGT
 A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A A C G T A C G T A C G T
A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:STGTRAGATGAA--
--GWAAYHTGABMC
 A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A A C G T A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

SIX2/MA1119.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--STGTRAGATGAA--
AACTGAAACCTGATAC
 A C G T A C G T A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A A C G T A C G T
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-STGTRAGATGAA----
NNTTTTACATGTANNNT
 A C G T A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

SIX1/MA1118.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:STGTRAGATGAA-
--GTAACCTGATA
 A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A A C G T
A C G T A C G T C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:STGTRAGATGAA----
-TGWAAYCTGABACCB
 A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A A C G T A C G T A C G T A C G T
A C G T C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-STGTRAGATGAA----
ANTATTACATGTANNNN
 A C G T A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A A C G T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:STGTRAGATGAA--
--GWAAYHTGAKMC
 A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A A C G T A C G T
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--STGTRAGATGAA
AGGTGTGA------
 A C G T A C G T A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:STGTRAGATGAA
--GTCACATGAY
 A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C