Information for 5-TGAATAGC (Motif 29)

G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C
Reverse Opposite:
A T C G G T A C G C A T G T C A G A C T G A C T T G A C C G T A
p-value:1e-24
log p-value:-5.599e+01
Information Content per bp:1.593
Number of Target Sequences with motif7559.0
Percentage of Target Sequences with motif27.99%
Number of Background Sequences with motif6845.6
Percentage of Background Sequences with motif25.24%
Average Position of motif in Targets99.8 +/- 56.1bp
Average Position of motif in Background100.4 +/- 59.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGAATAGC--
GGAACAGCCG
 G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C A C G T A C G T
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGAATAGC
KCCAAAAATAGC
 A C G T A C G T A C G T A C G T G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGAATAGC
CCAAAAATAG-
 A C G T A C G T A C G T G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TGAATAGC--
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATAGC
NNTNTCATGAATGT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGAATAGC
GCTATAAATAGC
 A C G T A C G T A C G T A C G T G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGAATAGC
GCTAAAAATAGC
 A C G T A C G T A C G T A C G T G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGAATAGC
DCYAAAAATAGM
 A C G T A C G T A C G T A C G T G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGAATAGC-
ATGMATATDC
 A C G T G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C A C G T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGAATAGC-
ATGAATATTC
 A C G T G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C A C G T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C