Information for 1-CGMTGGACAT (Motif 3)

A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T
Reverse Opposite:
G C T A C G A T T A C G A C G T A G T C G A T C C T G A A C G T T A G C A C T G
p-value:1e-42
log p-value:-9.686e+01
Information Content per bp:1.841
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.4 +/- 56.3bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGMTGGACAT
TCACCTCTGGGCAG
 A C G T A C G T A C G T A C G T A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PBX2/MA1113.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGMTGGACAT-
GTGATTGACAGG
 A C G T A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T A C G T
T C A G C G A T C A T G C T G A A C G T C A G T A C T G C T G A A G T C C T G A A T C G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGMTGGACAT
-NGTGGGCAT
 A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGMTGGACAT-
CYWSTGGTCARA
 A C G T A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T A C G T
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGMTGGACAT
---TTGACAG
 A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGMTGGACAT-
---TTGACAGG
 A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGMTGGACAT-
-AATGGAAAAT
 A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T A C G T
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGMTGGACAT-----
NNATTGGACTTTNGNN
 A C G T A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGMTGGACAT
---TGGAAAA
 A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGMTGGACAT
--GTGGAT--
 A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T