Information for 6-GGCAGATC (Motif 31)

A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C
Reverse Opposite:
A C T G C G T A A G C T A G T C A G C T A C T G A T G C A G T C
p-value:1e-24
log p-value:-5.540e+01
Information Content per bp:1.875
Number of Target Sequences with motif1029.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif742.8
Percentage of Background Sequences with motif2.74%
Average Position of motif in Targets101.7 +/- 55.2bp
Average Position of motif in Background100.3 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGATC
ATGCCAGACN
 A C G T A C G T A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGCAGATC------
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGATC----
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGATC
TNNGGGCAG---
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCAGATC
GGCVGTTR
 A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

NEUROD1/MA1109.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGCAGATC----
GGACAGATGGCAG
 A C G T A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C A C G T A C G T A C G T A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCAGATC-
TGGCAGTTGG
 A C G T A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCAGATC--
AACAGATGGC
 A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C A C G T A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCAGATC--
AACAGATGGT
 A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C A C G T A C G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

TWIST1/MA1123.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCAGATC---
ATTCCAGATGTTT
 A C G T A C G T A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C A C G T A C G T A C G T
C T G A G C A T C G A T T G A C G T A C C G T A A T C G T G C A G A C T A C T G A C G T A C G T G A C T