Information for 18-CCTGGTAGGA (Motif 39)

A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A
Reverse Opposite:
A G C T A G T C A T G C A C G T C G T A A G T C A G T C C G T A A C T G A C T G
p-value:1e-16
log p-value:-3.911e+01
Information Content per bp:1.967
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets104.8 +/- 51.2bp
Average Position of motif in Background151.3 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCTGGTAGGA--
GCACAYAGTAGGKCY
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTGGTAGGA-------
-CTACTAGGATGTNNTN
 A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGTAGGA---
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTGGTAGGA--
-CAGGTAAGTAT
 A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTGGTAGGA--
CTCCCTGGGAGGCCN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCTGGTAGGA---
---GGGAGGACNG
 A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCTGGTAGGA
ACATCCTGNT----
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGGTAGGA
RYHYACCTGB-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGTAGGA
CCCCCTGCTGTG-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGTAGGA
TTCCNGGAAG--
 A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T