Information for 14-CGCCCGAC (Motif 40)

G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C C T A G C T A G A T C G G T A C C A T G
p-value:1e-16
log p-value:-3.812e+01
Information Content per bp:1.749
Number of Target Sequences with motif1052.0
Percentage of Target Sequences with motif3.89%
Number of Background Sequences with motif810.6
Percentage of Background Sequences with motif2.99%
Average Position of motif in Targets98.4 +/- 55.8bp
Average Position of motif in Background97.4 +/- 52.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGCCCGAC--
--CCAGACAG
 G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGCCCGAC----
--CCAGACRSVB
 G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGCCCGAC------
CAAATCCAGACATCACA
 A C G T A C G T A C G T G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGCCCGAC--
---TTGACAG
 G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CGCCCGAC
AGAGRRACAGCWGAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCGAC---
TTTCCCGCCMAV
 A C G T G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C A C G T A C G T A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGCCCGAC
AGCGCGCC
 G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGCCCGAC-
-TCTAGACA
 G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C A C G T
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGCCCGAC------
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCGAC-
NNTTCCCGCCC
 A C G T A C G T G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C A C G T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C