Information for 22-CGAACSGCAT (Motif 42)

A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T
Reverse Opposite:
C G T A A C G T C A T G T G A C A T G C C T A G A C G T A G C T A G T C A T C G
p-value:1e-14
log p-value:-3.281e+01
Information Content per bp:1.733
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets116.7 +/- 51.7bp
Average Position of motif in Background113.6 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)2.52
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CGAACSGCAT
TGGAACAGMA-
 A C G T A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGAACSGCAT----
TNGAATTTCATTNAN
 A C G T A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGAACSGCAT--
GGGATTGCATNN
 A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGAACSGCAT
--AACCGANA
 A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGAACSGCAT--
NTAATBNAATTA
 A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T A C G T A C G T
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGAACSGCAT
GGAACAGCCG
 A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGAACSGCAT
GCGGACCBWA-
 A C G T A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T
A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGAACSGCAT---
---NTGGAATGTN
 A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGAACSGCAT-
CGGAAGTGAAAC
 A C G T A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:-11
Orientation:reverse strand
Alignment:-----------CGAACSGCAT
TGGCCANNNNNGGAACTGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T