Information for 23-CTAAAAACCC (Motif 43)

A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T C G T A A C T G
p-value:1e-13
log p-value:-3.045e+01
Information Content per bp:1.530
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets86.5 +/- 53.6bp
Average Position of motif in Background109.4 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTAAAAACCC---
GTATAAAAGGCGGGG
 A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTAAAAACCC---
GTATAAAAGGCGGGG
 A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTAAAAACCC
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAACCC
CCAATAAAAA---
 A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAACCC
CCAATAAAAA---
 A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTAAAAACCC
GTAAACA---
 A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CTAAAAACCC
TTCAAAWTAAAAGTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C A C G T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTAAAAACCC
VGCCATAAAA----
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C
T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A A C G T A C G T A C G T A C G T

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTAAAAACCC--------
---AAAACCTGGANHGGR
 A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTAAAAACCC-
---TAATCCCN
 A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G