Information for 24-ACGATCACAAGG (Motif 47)

C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C T G A C G T A C T G C G T A A C G T A G T C A C T G A C G T
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.530
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets106.6 +/- 55.4bp
Average Position of motif in Background102.4 +/- 51.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACGATCACAAGG-
---GTCACATGAY
 C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACGATCACAAGG---
AAAGGTCAAAAGGTCA
 A C G T C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

LEF1/MA0768.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACGATCACAAGG--
AAAGATCAAAGGGTT
 A C G T C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

GLI2/MA0734.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACGATCACAAGG
GCGACCACACTG
 C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACGATCACAAGG-
--GGTCACGTGGC
 C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T
A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACGATCACAAGG-
---GTCACGTGGT
 C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACGATCACAAGG----
AAGGTCAAAAGGTCAA
 C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

TFE3/MA0831.2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACGATCACAAGG
---GTCACGTG-
 C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G
A C G T A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACGATCACAAGG-
---VRRACAAWGG
 C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:ACGATCACAAGG-----
-------CAAGGHCANV
 C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G