Information for 4-CTTTGTGATGBG (Motif 5)

A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G
Reverse Opposite:
G T A C T G C A A T G C C G T A A C G T G T A C C G T A A G T C C G T A C T G A C G T A A T C G
p-value:1e-39
log p-value:-9.144e+01
Information Content per bp:1.833
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets101.6 +/- 58.1bp
Average Position of motif in Background112.2 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTGATGBG
NNCTTTGTTNN---
 A C G T A C G T A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTTTGTGATGBG---
CTTTGTTATGCAAAT
 A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G A C G T A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGTGATGBG
CCTTTGATGT---
 A C G T A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTTTGTGATGBG
CTTTGATGTGSB
 A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G
A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTTGTGATGBG---
CATTGTTATGCAAAT
 A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G A C G T A C G T A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTTTGTGATGBG---
TATTATGGGATGGATAA
 A C G T A C G T A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTGATGBG---
NNNNNATTGATGNGTGN
 A C G T A C G T A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTGATGBG
CCWTTGTYYB---
 A C G T A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTGATGBG
CCTTTGATST---
 A C G T A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CTTTGTGATGBG
AGGVNCCTTTGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T