Information for 7-CCCAAATCTCAT (Motif 8)

G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T
Reverse Opposite:
C T G A C G A T A C T G C G T A T C A G C G T A A G C T A C G T A C G T T C A G A C T G C T A G
p-value:1e-37
log p-value:-8.651e+01
Information Content per bp:1.892
Number of Target Sequences with motif188.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif62.5
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets99.5 +/- 57.7bp
Average Position of motif in Background101.0 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCCAAATCTCAT
--CAAATCACTG
 G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCCAAATCTCAT--
---AAATCACAGCA
 G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCCAAATCTCAT----
-TNGAATTTCATTNAN
 G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCCAAATCTCAT---
TCTCAAAGGTCACCTG
 A C G T G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCCAAATCTCAT--
--YTAATYNRATTA
 G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T A C G T A C G T
A C G T A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCCAAATCTCAT---
TCTCAAAGGTCACGAG
 A C G T G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCCAAATCTCAT-
---AAATCACTGC
 G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T A C G T
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCCAAATCTCAT-------
--GCAACCTCATTATNNNN
 G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCCAAATCTCAT--
--NTAATBNAATTA
 G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T A C G T A C G T
A C G T A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCCAAATCTCAT----
NNNTCCATCCCATAANN
 A C G T G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A