Information for 9-ACTTATAAGTGA (Motif 12)

C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A
Reverse Opposite:
A G C T G T A C G T C A A G T C C G A T G A C T T G C A G A C T C T G A C G T A C T A G G A C T
p-value:1e-32
log p-value:-7.496e+01
Information Content per bp:1.787
Number of Target Sequences with motif216.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif92.8
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets102.0 +/- 55.6bp
Average Position of motif in Background91.9 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:ACTTATAAGTGA-
----TTAAGTGGN
 C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:ACTTATAAGTGA-
----TTAAGTGGT
 C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PH0115.1_Nkx2-6/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACTTATAAGTGA----
AATNTTAAGTGGNTNN
 C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A A C G T A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

Nkx2-5/MA0063.1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ACTTATAAGTGA
----TTAATTG-
 C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A
A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:ACTTATAAGTGA
----TTAAGTGC
 C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A
A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACTTATAAGTGA-----
NTNNTTAAGTGGTTANN
 C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACTTATAAGTGA-
---NTCAAGTGGN
 C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACTTATAAGTGA-----
NTNNTTAAGTGGNTNAN
 C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACTTATAAGTGA----
AAATTCAAGTGGNTTN
 C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACTTATAAGTGA----
NANTTTCAAGTGGTTAN
 A C G T C G T A G A T C C G A T G A C T C T G A A C G T C T G A C G T A C T A G A C G T A C T G C T G A A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T