Information for 6-ACGCAACAGG (Motif 13)

T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G
Reverse Opposite:
A T G C A G T C C G A T C T A G A C G T A C G T C T A G A G T C A C T G A C G T
p-value:1e-31
log p-value:-7.315e+01
Information Content per bp:1.851
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets112.2 +/- 57.4bp
Average Position of motif in Background88.3 +/- 52.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ACGCAACAGG---
ATGCAACAGGTGG
 T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G A C G T A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:ACGCAACAGG--
--GCAACAGGTG
 T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G A C G T A C G T
A C G T A C G T A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ACGCAACAGG-----
GAGCAACAGGTGGTT
 T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ACGCAACAGG---
CCACACAGCAGGAGA
 A C G T A C G T T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACGCAACAGG---
CCACACAGCAGGAGA
 A C G T A C G T T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACGCAACAGG---
GAGCACAGCAGGACA
 A C G T A C G T T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

CEBPB/MA0466.2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACGCAACAGG
ATTGCGCAAT---
 A C G T A C G T A C G T T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G
T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACGCAACAGG
TBGCACGCAA----
 A C G T A C G T A C G T A C G T T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

GMEB2/MA0862.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACGCAACAGG
TTACGTAA----
 A C G T A C G T T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ACGCAACAGG---
-CACAGCAGGGGG
 T C G A A G T C C T A G A G T C G T C A C G T A A G T C C G T A C T A G A T C G A C G T A C G T A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G