Information for 5-GCCTAATT (Motif 23)

T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T
Reverse Opposite:
C T G A C G T A A C G T G C A T C T G A A C T G A T C G A T G C
p-value:1e-27
log p-value:-6.323e+01
Information Content per bp:1.617
Number of Target Sequences with motif6341.0
Percentage of Target Sequences with motif26.45%
Number of Background Sequences with motif6123.9
Percentage of Background Sequences with motif23.41%
Average Position of motif in Targets100.0 +/- 56.2bp
Average Position of motif in Background99.4 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EN1/MA0027.2/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GCCTAATT--
--CTAATTAG
 T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T A C G T A C G T
A C G T A C G T A G T C G C A T T C G A C G T A A C G T A C G T C T G A T A C G

GBX2/MA0890.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GCCTAATT---
-NNTAATTGNN
 T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T A C G T A C G T A C G T
A C G T T A C G A G T C C G A T T G C A T G C A A C G T A G C T C T A G T A C G A G C T

Shox2/MA0720.1/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GCCTAATT--
--NTAATTAG
 T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T A C G T A C G T
A C G T A C G T A G C T C G A T G T C A C G T A C A G T C G A T C T G A T C A G

ISX/MA0654.1/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GCCTAATT--
--NTAATTAG
 T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T A C G T A C G T
A C G T A C G T A G C T C G A T G T C A C G T A C A G T C A G T C T G A T C A G

PRRX1/MA0716.1/Jaspar

Match Rank:5
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GCCTAATT--
--NTAATTAN
 T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T A C G T A C G T
A C G T A C G T A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G

Msx3/MA0709.1/Jaspar

Match Rank:6
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GCCTAATT--
--NTAATTGN
 T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T A C G T A C G T
A C G T A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G

Dlx2/MA0885.1/Jaspar

Match Rank:7
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GCCTAATT--
--NTAATTGN
 T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T A C G T A C G T
A C G T A C G T C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C

LBX2/MA0699.1/Jaspar

Match Rank:8
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GCCTAATT---
-NNTAATTGGN
 T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T A C G T A C G T A C G T
A C G T A T C G G A T C G C A T T G C A T G C A A C G T A C G T C T A G T C A G A G T C

Prrx2/MA0075.2/Jaspar

Match Rank:9
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GCCTAATT--
--NTAATTGN
 T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T A C G T A C G T
A C G T A C G T A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G

SHOX/MA0630.1/Jaspar

Match Rank:10
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCCTAATT--
--TTAATTGG
 T A C G T A G C T G A C G A C T C G T A T G C A G C A T A G C T A C G T A C G T
A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G