Information for 16-GATAAAAACTAG (Motif 26)

A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
Reverse Opposite:
A G T C A G C T C G T A T A C G A C G T C A G T A C G T A C G T A G C T C G T A A C G T A T G C
p-value:1e-25
log p-value:-5.897e+01
Information Content per bp:1.892
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif22.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets101.7 +/- 54.5bp
Average Position of motif in Background99.2 +/- 54.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13/MA0909.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GATAAAAACTAG
CCAATAAAAA----
 A C G T A C G T A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GATAAAAACTAG
CCAATAAAAA----
 A C G T A C G T A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GATAAAAACTAG
GTCATAAAAN----
 A C G T A C G T A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GATAAAAACTAG
GGTAATAAAAA----
 A C G T A C G T A C G T A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GATAAAAACTAG
AAGCCATAAAA-----
 A C G T A C G T A C G T A C G T A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GATAAAAACTAG
GCAATAAAA-----
 A C G T A C G T A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GATAAAAACTAG
CCAATAAAAC----
 A C G T A C G T A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GATAAAAACTAG
CTACCAATAAAATTCT-
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GATAAAAACTAG
NCYAATAAAA-----
 A C G T A C G T A C G T A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GATAAAAACTAG
CCYMATAAAA-----
 A C G T A C G T A C G T A T C G C G T A A C G T C T G A C G T A C G T A G C T A G T C A A G T C G C A T C T G A T C A G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T