Information for 1-CATTTTGGYA (Motif 3)

G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A
Reverse Opposite:
C A G T C T A G G A T C G T A C G C T A T G C A G T C A C G T A A C G T C A T G
p-value:1e-39
log p-value:-9.037e+01
Information Content per bp:1.637
Number of Target Sequences with motif3920.0
Percentage of Target Sequences with motif16.35%
Number of Background Sequences with motif3496.1
Percentage of Background Sequences with motif13.37%
Average Position of motif in Targets100.4 +/- 55.6bp
Average Position of motif in Background99.0 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CATTTTGGYA
GCNGCCATCTTG---
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CATTTTGGYA--
--NNTTGGCANN
 G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CATTTTGGYA----
WCATTTTGKCCTCYT
 A C G T G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A A C G T A C G T A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CATTTTGGYA--
---NTTGGCANN
 G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CATTTTGGYA-
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATTTTGGYA
CTCATTGTC---
 A C G T A C G T G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CATTTTGGYA
NNCCATTGTNN--
 A C G T A C G T A C G T G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CATTTTGGYA-
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATTTTGGYA-
---CTTGGCAA
 G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CATTTTGGYA
GCCGCCATCTTG---
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A G C A T C A G T A C G T C G A T A C T G C T A G G A T C G T C A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T