Information for 20-CAATGGGTTAGT (Motif 30)

T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T
Reverse Opposite:
C G T A G A T C G C A T G T C A G C T A G A T C G A T C G T A C G C T A C G A T C G A T A C T G
p-value:1e-23
log p-value:-5.450e+01
Information Content per bp:1.526
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets98.5 +/- 50.2bp
Average Position of motif in Background143.2 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX13/MA1120.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAATGGGTTAGT
AAACAATGGCA----
 A C G T A C G T A C G T T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CAATGGGTTAGT
VRAACAATGG------
 A C G T A C G T A C G T A C G T T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CAATGGGTTAGT
NNTNNACAATGGGANNN-
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CAATGGGTTAGT
NMMNBAAAGGGTTAA-
 A C G T A C G T A C G T A C G T T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAATGGGTTAGT
GAACAATGG------
 A C G T A C G T A C G T T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CAATGGGTTAGT
GAACAATGGN-----
 A C G T A C G T A C G T T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAATGGGTTAGT
RACAAWGG------
 A C G T A C G T T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAATGGGTTAGT
AACAAAGG------
 A C G T A C G T T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAATGGGTTAGT-
AACAATGNTATTGTT
 A C G T A C G T T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAATGGGTTAGT
GACAATGNN-----
 A C G T A C G T T G A C G C T A G C T A C G A T C A T G C T A G C T A G C G A T A C G T C G T A C T A G G C A T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T