Information for 13-RTGAGGCMTT (Motif 34)

C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T
Reverse Opposite:
C G T A G T C A A C T G C A T G T A G C A G T C A C G T A G T C C T G A G A C T
p-value:1e-18
log p-value:-4.292e+01
Information Content per bp:1.771
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif28.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets105.5 +/- 53.7bp
Average Position of motif in Background92.1 +/- 49.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JDP2/MA0655.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:RTGAGGCMTT
ATGAGTCAT-
 C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-RTGAGGCMTT
GATGAGTCATN
 A C G T C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:RTGAGGCMTT-
---AGGCCTNG
 C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-RTGAGGCMTT
HAWGRGGCCM-
 A C G T C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T

JUN::JUNB/MA1132.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-RTGAGGCMTT
GATGACTCAT-
 A C G T C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T
C A T G T C G A C A G T A C T G C T G A A T G C C A G T G T A C G C T A G A C T A C G T

FOS::JUNB/MA1134.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-RTGAGGCMTT-
GATGAGTCATCC
 A C G T C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T A C G T
C A T G T C G A A C G T A C T G G T C A T A C G A C G T G T A C C G T A A G C T G T A C T G A C

FOS::JUND/MA1141.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--RTGAGGCMTT-
GGATGAGTCATCG
 A C G T A C G T C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T A C G T
A C T G C A T G T C G A A G C T A C T G G T C A T C A G A C G T G T A C C G T A A G C T T G A C T A C G

FOSL2::JUN/MA1130.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--RTGAGGCMTT
GGATGAGTCATC
 A C G T A C G T C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T
A C T G C A T G T C G A A C G T A C T G G T C A T A C G A C G T G T A C C G T A A G C T G T A C

BATF::JUN/MA0462.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:RTGAGGCMTT--
-TGAGTCATTTC
 C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T A C G T A C G T
A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

FOS::JUN/MA0099.3/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RTGAGGCMTT
NATGACTCAT-
 A C G T C T G A A G C T T C A G G T C A T C A G A T C G G A T C T G A C A C G T C G A T
A C T G T C G A C G A T C A T G C G T A A T G C C A G T G T A C C T G A A G C T A C G T