Information for 3-TAAGGCCCTTAC (Motif 4)

A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C
Reverse Opposite:
T A C G A C G T T C G A C G T A C T A G C T A G A C T G T G A C A G T C A C G T A C G T C G T A
p-value:1e-38
log p-value:-8.789e+01
Information Content per bp:1.796
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.0 +/- 57.8bp
Average Position of motif in Background106.7 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAAGGCCCTTAC
CTAATCCTCTT--
 A C G T A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAAGGCCCTTAC-
-RGGGCACTAACY
 A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C A C G T
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAAGGCCCTTAC
-AAGACCCYYN-
 A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TAAGGCCCTTAC
--AAGCACTTAA
 A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TAAGGCCCTTAC
----BCMATTAG
 A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C
A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TAAGGCCCTTAC
--AASCACTCAA
 A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGGCCCTTAC
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAAGGCCCTTAC----
CTTAACCACTTAAGGAT
 A C G T A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TAAGGCCCTTAC
---ACCACTTAA
 A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TAAGGCCCTTAC
TAATTNVATTAN
 A C G T T G C A C G T A A C T G A C T G A G T C G A T C A G T C A C G T A G C T C G T A A T G C
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G