Information for 19-TAGCAGCAAC (Motif 41)

A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C
Reverse Opposite:
A C T G A C G T A G C T A C T G A G T C A C G T A C T G A G T C A C G T C G T A
p-value:1e-15
log p-value:-3.585e+01
Information Content per bp:1.985
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.6 +/- 49.7bp
Average Position of motif in Background114.7 +/- 47.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TAGCAGCAAC-
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAGCAGCAAC
SCCTAGCAACAG-
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------TAGCAGCAAC----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAGCAAC
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAGCAGCAAC-
-TGCSGCANTN
 A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C A C G T
A C G T A G C T T C A G G A T C A T C G T C A G A T G C T G C A G T C A C G A T C T A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAGCAAC
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TAGCAGCAAC
---CAGCC--
 A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGCAGCAAC
TTGCAACATN
 A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAGCAGCAAC-
-AGCAGCTGCT
 A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Rhox11/MA0629.1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCAGCAAC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A G T C C T G A C G T A A G T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T