Information for 24-GAGTGTAGAA (Motif 47)

A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T C G T A A G T C C G T A A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.722e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets87.2 +/- 51.2bp
Average Position of motif in Background92.1 +/- 46.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGTGTAGAA
TTRAGTGSYK--
 A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

KLF4/MA0039.3/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGTAGAA
NNAGGGTGTGG--
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A
C T A G T A G C C G T A C T A G A C T G T C A G G A C T C A T G A G C T A C T G A C T G A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGTAGAA------
NNGATCTAGAACCTNNN
 A C G T A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGTGTAGAA
-TGTCTAGA-
 A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGTGTAGAA-----
NGNTCTAGAACCNGV
 A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAGTGTAGAA
BTBRAGTGSN---
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGTGTAGAA-
-TGTCTAGACG
 A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGTAGAA
CTYRAGTGSY---
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGTAGAA
TTGAGTGSTT--
 A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGTAGAA
TGGAATGYRG--
 A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T C G T A A C T G C G T A C G T A
G C A T A C T G A C T G C G T A C G T A A C G T A C T G A G C T T C A G A C T G A C G T A C G T