Information for 19-AATTGAAT (Motif 48)

C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T
Reverse Opposite:
C G T A A C G T A G C T G T A C T G C A G T C A C A G T C G A T
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.716
Number of Target Sequences with motif8185.0
Percentage of Target Sequences with motif34.14%
Number of Background Sequences with motif8380.9
Percentage of Background Sequences with motif32.04%
Average Position of motif in Targets99.4 +/- 56.0bp
Average Position of motif in Background100.2 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AATTGAAT----
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AATTGAAT-
TAATTGATTA
 A C G T C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T A C G T
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AATTGAAT---
-CTGGAATGYA
 C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T A C G T A C G T A C G T
A C G T G T A C G A C T A C T G A C T G C G T A C G T A A C G T A C T G G A T C T C G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AATTGAAT--
AATGGAAAAT
 C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T A C G T A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------AATTGAAT---
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AATTGAAT---
TAATTNAATTAA
 A C G T C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T A C G T A C G T A C G T
A C G T C G T A C G T A A C G T A G C T A C G T C T G A C G T A A C G T A C G T C G T A G C T A

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AATTGAAT-
ATTTGAATT
 C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T A C G T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AATTGAAT
TATTGAYY
 C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T
G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AATTGAAT--
AATGGAAAAT
 C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T A C G T A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AATTGAAT
CCACTTGAA-
 A C G T A C G T C G T A G T C A A C G T A C G T A C T G C T G A G T C A G C A T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T