Information for 21-TCGGAYTT (Motif 49)

A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T
Reverse Opposite:
C G T A C G T A T C A G C G A T G T A C A T G C T C A G T G C A
p-value:1e-10
log p-value:-2.403e+01
Information Content per bp:1.662
Number of Target Sequences with motif2253.0
Percentage of Target Sequences with motif9.40%
Number of Background Sequences with motif2149.8
Percentage of Background Sequences with motif8.22%
Average Position of motif in Targets100.3 +/- 55.8bp
Average Position of motif in Background99.9 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TCGGAYTT-----
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TCGGAYTT----
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCGGAYTT-------
ATTGGACTTTGACCCC
 A C G T A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0115.1_Ehf_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCGGAYTT----
AAGATCGGAANTNNNA
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T A C G T A C G T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCGGAYTT---
AAAAACGGATTATTG
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Dmbx1/MA0883.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCGGAYTT-----
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCGGAYTT-----
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCGGAYTT-
-CGGATTAN
 A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T A C G T
A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCGGAYTT----
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCGGAYTT--
--GCACTTAA
 A C G T A G T C T A C G A C T G G C T A A G T C G C A T G C A T A C G T A C G T
A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A