Information for 4-AAAGGTTCAACT (Motif 5)

G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T
Reverse Opposite:
C T G A T A C G C G A T C G A T C T A G C T G A G T C A T G A C G T A C G C A T C A G T A C G T
p-value:1e-37
log p-value:-8.570e+01
Information Content per bp:1.901
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets101.7 +/- 55.9bp
Average Position of motif in Background110.4 +/- 47.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAGGTTCAACT
CAAAGKTCAA--
 G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGGTTCAACT
NMMNBAAAGGGTTAA--
 A C G T A C G T A C G T A C G T A C G T G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAGGTTCAACT
-TGAGTTCA---
 G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T
A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAAGGTTCAACT--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

MYBL2/MA0777.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAGGTTCAACT---
AACCGTTAAACGGTC
 G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T A C G T A C G T A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTTCAACT
GGAGAAAGGTGCGA--
 A C G T A C G T A C G T A C G T G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAAGGTTCAACT---
-----ACCAACTGTC
 G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGTTCAACT
TTAATGTTTAACC
 A C G T G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGTTCAACT
ANGNAAAGGTCA----
 A C G T A C G T A C G T A C G T G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAGGTTCAACT
CAAGCTT-----
 G T C A G C T A C G T A A C T G A C T G A C G T A G C T A G T C G C T A C G T A A G T C A G C T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T