Information for 25-CAACCACATA (Motif 50)

T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A
Reverse Opposite:
A C G T T C G A G A C T T C A G A C G T T A C G T A C G C G A T G A C T A T C G
p-value:1e-7
log p-value:-1.777e+01
Information Content per bp:1.450
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets115.2 +/- 49.9bp
Average Position of motif in Background99.3 +/- 45.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CAACCACATA-
NWAACCACADNN
 A C G T T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CAACCACATA
AAACCACANN
 T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CAACCACATA-
AAACCACAGAN
 T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAACCACATA
NAAACCACAG-
 A C G T T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAACCACATA
AAACCGCAAA
 T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CAACCACATA
AAACCACAGC
 T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CAACCACATA-
--ACCACTTAA
 T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A A C G T
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAACCACATA-----
CATAACCACTTAACAAC
 A C G T A C G T T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAACCACATA-----
CTTAACCACTTAAGGAT
 A C G T A C G T T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CAACCACATA-
--ACCACTTAA
 T A G C C T G A G C T A A T G C A T G C T C G A A G T C C T G A A G C T T G C A A C G T
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A