Information for 7-TTTCATTAAAAA (Motif 10)

G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A
Reverse Opposite:
A G C T A C G T A C G T A C G T A C G T C G T A C G T A A C G T T A C G C G T A T C G A C G T A
p-value:1e-9
log p-value:-2.172e+01
Information Content per bp:1.851
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif240.5
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets116.2 +/- 36.1bp
Average Position of motif in Background100.1 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---TTTCATTAAAAA--
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PH0100.1_Lmx1a/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TTTCATTAAAAA--
CGAATTAATTAAAAACC
 A C G T A C G T A C G T G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A A C G T A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PH0101.1_Lmx1b/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATTAAAAA--
NNAATTAATTAAAAANN
 A C G T A C G T A C G T G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A A C G T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

PH0091.1_Lhx1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TTTCATTAAAAA--
CGAATTAATTAATAATG
 A C G T A C G T A C G T G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A A C G T A C G T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTCATTAAAAA--
GACNTCATTAATAANN
 A C G T A C G T G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.72
Offset:4
Orientation:forward strand
Alignment:TTTCATTAAAAA
----ATTAAA--
 G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TTTCATTAAAAA--
CGAATTAATTAAATACT
 A C G T A C G T A C G T G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTTCATTAAAAA
-GTAATTAA---
 G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A
A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TTTCATTAAAAA
--YCATTAMC--
 G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A
A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTTCATTAAAAA
-NTAATTAATAT
 G C A T A G C T C G A T A T G C C G T A C G A T C G A T C G T A C G T A G T C A G T C A C T G A
A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T