Information for 13-CTTTGTTATGWG (Motif 18)

A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G
Reverse Opposite:
A G T C C G T A G A T C G T C A A C G T T C G A G C T A A G T C G T C A C T G A C G T A T C A G
p-value:1e-7
log p-value:-1.829e+01
Information Content per bp:1.721
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif72.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets85.5 +/- 62.9bp
Average Position of motif in Background99.6 +/- 54.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTTATGWG-
NCNTTTGTTATTTNN
 A C G T A C G T A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTTATGWG
NNCTTTGTTNN---
 A C G T A C G T A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTATGWG
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTATGWG
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTATGWG
CCTTTGTTTT---
 A C G T A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTATGWG
CCWTTGTY-----
 A C G T A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTATGWG
CCWTTGTYYB---
 A C G T A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTTTGTTATGWG---
CTTTGTTATGCAAAT
 A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G A C G T A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTTATGWG--
NNTTTTGTTTTGATNT
 A C G T A C G T A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGTTATGWG
CCTTTGATGT---
 A C G T A G T C A C G T A G C T A C G T A C T G C G A T A G C T C G T A C A G T C T A G C G A T C T A G
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T