Information for 11-ACAATGCACG (Motif 21)

C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T
p-value:1e-5
log p-value:-1.208e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.3 +/- 50.3bp
Average Position of motif in Background106.4 +/- 71.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX13/MA1120.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ACAATGCACG
AAACAATGGCA-
 A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGCACG
GACAATGNN--
 A C G T C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGCACG
VRRACAAWGG---
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------ACAATGCACG
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGCACG
VRAACAATGG---
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGCACG
RNAACAATGG---
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGCACG
AAAACAATGG---
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ACAATGCACG-
AATGAACAATGGAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATGCACG
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACAATGCACG
RAACAATGGN--
 A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A A G T C A C T G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T