Information for 17-TTTATTGGATAA (Motif 22)

A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A
p-value:1e-5
log p-value:-1.208e+01
Information Content per bp:1.975
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.8 +/- 62.1bp
Average Position of motif in Background106.2 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGGATAA
NTTTTATTGG----
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGGATAA
TTTTTATTGG----
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATTGGATAA
NNAATTTTATTGGNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGGATAA
NTTTTATTGG----
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATTGGATAA
NNANTTTTATTGGNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTGGATAA
TTTTATTRGN---
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A
C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTTATTGGATAA
TTTTATKRGG---
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTATTGGATAA
TTGATTRGRTTA
 A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A
G A C T C G A T A C T G C G T A A C G T A C G T C T A G C T A G C T A G A G C T A G C T C G T A

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGGATAA
NTTTTATDRG----
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A
C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTTATTGGATAA-
-TGATTGGCTANN
 A C G T A C G T A C G T C G T A A G C T A C G T A C T G A C T G C G T A A C G T C G T A C G T A A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T