Information for 14-GGGTAABTTT (Motif 24)

A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A T C G A A C G T A C G T C G T A A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.091e+01
Information Content per bp:1.874
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif201.8
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets85.8 +/- 53.3bp
Average Position of motif in Background109.7 +/- 58.7bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)2.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GGGTAABTTT
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGTAABTTT
CAGGTAAGTAT
 A C G T A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGGTAABTTT
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGGTAABTTT-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGTAABTTT
AGGTCA----
 A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

RELB/MA1117.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGTAABTTT
NNGGGGAATNC-
 A C G T A C G T A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGTAABTTT-----
NNNGGTAATTATNGNGN
 A C G T A C G T A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

NR1H4/MA1110.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGTAABTTT
NAGGTCATTGA
 A C G T A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

PRDM1/MA0508.2/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGGTAABTTT---
---TCACTTTCAC
 A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G A T C T C G A G A T C C A G T C G A T G C A T T G A C G C T A G A T C

Dlx1/MA0879.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGTAABTTT-
-NNTAATTANN
 A C T G A C T G C T A G A C G T G T C A C G T A A G C T A G C T A C G T A C G T A C G T
A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G