Information for 20-TTTTTATGGGGG (Motif 26)

A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G
Reverse Opposite:
A G T C A G T C A T G C A G T C A G T C C G T A A C G T C G T A C G T A C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.356e+00
Information Content per bp:1.969
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.3 +/- 50.4bp
Average Position of motif in Background64.3 +/- 41.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TTTTTATGGGGG
-TTTTATKRGG-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TTTTTATGGGGG
NTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTTTTATGGGGG
NTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TTTTTATGGGGG
TTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TTTTTATGGGGG
-TTTTATTRGN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G
A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTTTTATGGGGG
NTTTTATDRG--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G
C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G A C G T A C G T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTTTTATGGGGG
-TTTTATGGCB-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G
A C G T G C A T C G A T G C A T G A C T G C T A A G C T C A T G C T A G A T G C A G T C A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTTTTATGGGGG
-TTTAATTGCN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTATGGGGG-
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TTTTTATGGGGG
-TTTTATGGCM-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A T C G A C T G A C T G
A C G T C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C A C G T