Information for 1-CATCATAACATC (Motif 1)

G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C
Reverse Opposite:
C T A G C G T A A C G T A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C T G
p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.888
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets90.4 +/- 69.8bp
Average Position of motif in Background97.0 +/- 81.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CATCATAACATC--
ATGTCACAACAACAC
 A C G T G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATCATAACATC---
AACACCAAAACAAAGGA
 A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CATCATAACATC-
CAAACAACAACACCT
 A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATCATAACATC
-GTCGTAAAAT-
 G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C
A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATCATAACATC---
ATATCAAAACAAAACA
 A C G T G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATCATAACATC-
CTTATCTCHMCATCT
 A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C A C G T
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CATCATAACATC
-GTCATAAAAN-
 G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CATCATAACATC
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATCATAACATC
-GTCGTAAAAA-
 G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CATCATAACATC
-ATCACCCCAT-
 G T A C C G T A A C G T A G T C C G T A C G A T G T C A C G T A G T A C G T C A A C G T A G T C
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T