Information for 8-AATTGTGAGG (Motif 16)

G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G
Reverse Opposite:
A T G C A G T C C G A T A G T C G T C A G T A C C G T A T G C A A C G T C A G T
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.830
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif4.14%
Number of Background Sequences with motif371.3
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets121.6 +/- 45.3bp
Average Position of motif in Background100.3 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AATTGTGAGG--
AAAATTGTTATGAA
 A C G T A C G T G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AATTGTGAGG--
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AATTGTGAGG-
CTATAATTGTTAGCG
 A C G T A C G T A C G T A C G T G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTGTGAGG
CTCATTGTC---
 A C G T A C G T G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATTGTGAGG-------
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AATTGTGAGG-
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATTGTGAGG
AGGTGTGA--
 G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATTGTGAGG
-ATTGTTA--
 G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AATTGTGAGG
NNCTNAATTATGANN
 A C G T A C G T A C G T A C G T A C G T G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATTGTGAGG
-ATTGTT---
 G T C A G T C A A C G T A C G T C A T G A C G T A C T G C G T A C T A G A T C G
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T