Information for 12-CATRTGACTACT (Motif 19)

G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T
Reverse Opposite:
C G T A A T C G A C G T C G T A C T A G A C G T A G T C C G T A A G C T C T G A A C G T A C T G
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.774
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif39.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets87.4 +/- 33.0bp
Average Position of motif in Background84.3 +/- 72.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATRTGACTACT
RTCATGTGAC----
 A C G T A C G T G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATRTGACTACT
GCCACGTGACC---
 A C G T A C G T G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CATRTGACTACT---
ACCGTGACTAATTNN
 G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CATRTGACTACT
--CATGAC----
 G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T
A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CATRTGACTACT-
---ATGAATATTC
 G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T A C G T
A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CATRTGACTACT
ACCACGTGAC----
 A C G T A C G T G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CATRTGACTACT
GTAATCDGATTA--
 A C G T A C G T G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CATRTGACTACT
-NCGTGACN---
 G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T

TFE3/MA0831.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATRTGACTACT
CACGTGAC----
 G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T
A G T C C G T A A G T C T C A G A C G T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

FOSL1::JUNB/MA1137.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATRTGACTACT--
-TGATGACTCATAC
 G T A C G T C A A G C T T C G A A C G T C T A G C G T A G A T C A C G T C G T A A T G C C G A T A C G T A C G T
A C G T G A C T C A T G T C G A C G A T C A T G C G T A A T G C C A G T G T A C C T G A A G C T T G C A G T A C