Information for 13-ACAAGTCAGAAA (Motif 20)

C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
Reverse Opposite:
C G A T A C G T A G C T A T G C A G C T A C T G C T G A G T A C G C A T C G A T A T C G C G A T
p-value:1e-8
log p-value:-1.862e+01
Information Content per bp:1.801
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif109.3
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets74.1 +/- 58.4bp
Average Position of motif in Background101.1 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTCAGAAA
AATATACATGTAAAACA
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0083.1_Irx3_1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTCAGAAA
AAAATACATGTAATACT
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTCAGAAA
AATATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTCAGAAA
AATATACATGTAATATA
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTCAGAAA
TAAATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACAAGTCAGAAA
AAAAGTCAA---
 C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTCAGAAA
AAAATACATGTAAAAAT
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACAAGTCAGAAA
DGCACACGTG-----
 A C G T A C G T A C G T C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
C T G A T C A G G T A C T G C A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ACAAGTCAGAAA
AATGCCACGTCATC--
 A C G T A C G T A C G T A C G T C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACAAGTCAGAAA
NNATAAGGNN----
 A C G T A C G T C G T A A T G C C G T A C G T A A C T G A G C T T G A C C T G A A T C G C T G A T G C A C G T A
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T A C G T